pantierra/efast-phenocam-validation
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Renaming.

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This commit is contained in:
Felix Delattre 2026-02-20 21:57:42 +01:00
parent f9da4aef7d
commit 3919b8e871
12 changed files with 953 additions and 203 deletions
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38
run.py
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@ -1,31 +1,28 @@
from call_efast import run_all_efast_scenarios
from post_process import process_all_scenarios
from generate_indexes import (
generate_ndvi_raw,
from fusion import run_all_efast_scenarios
from postprocessing import process_all_scenarios
from metrics_indices import (
create_ndvi_timeseries_raw,
generate_ndvi_post_process,
create_ndvi_timeseries_post_process,
generate_gcc_post_process,
create_gcc_timeseries_post_process,
create_s2_bands_timeseries_post_process,
)
from download_s2 import download_s2
from download_s3 import download_s3
from download_phenocam import download_phenocam, download_phenocam_greenness
from clouds import detect_clouds
from calculate_metrics import calculate_all_metrics
from acquisition_s2 import download_s2
from acquisition_s3 import download_s3
from acquisition_phenocam import download_phenocam, download_phenocam_greenness
from metrics_stats import calculate_all_metrics
def run_pipeline(season, site_position, site_name):
"""Run pipeline (downloads + EFAST fusion + post-process + metrics)."""
try:
# Download steps (needed for new site/season)
download_s2(season, site_position, site_name)
download_s3(season, site_position, site_name)
download_phenocam(season, site_position, site_name)
download_phenocam_greenness(season, site_position, site_name)
#download_s2(season, site_position, site_name)
#download_s3(season, site_position, site_name)
#download_phenocam(season, site_position, site_name)
#download_phenocam_greenness(season, site_position, site_name)
print(f"Generating NDVI for raw data: {site_name}, {season}")
create_ndvi_timeseries_raw(season, site_position, site_name)
#print(f"Generating NDVI for raw data: {site_name}, {season}")
#create_ndvi_timeseries_raw(season, site_position, site_name)
print(f"Running EFAST fusion for all scenarios: {site_name}, {season}")
run_all_efast_scenarios(season, site_position, site_name)
@ -39,6 +36,9 @@ def run_pipeline(season, site_position, site_name):
print(f"Generating GCC for final outputs: {site_name}, {season}")
create_gcc_timeseries_post_process(season, site_position, site_name)
print(f"Generating S2 band timeseries: {site_name}, {season}")
create_s2_bands_timeseries_post_process(season, site_position, site_name)
print(f"Calculating metrics: {site_name}, {season}")
calculate_all_metrics(season, site_name, site_position)
@ -48,6 +48,8 @@ def run_pipeline(season, site_position, site_name):
if __name__ == "__main__":
run_pipeline(2024, (47.116171, 11.320308), "innsbruck")
# forthgr - FORTH Heraklion Greece, Agriculture, 2024
# sites.geojson: lon=25.0743, lat=35.3045
run_pipeline(2024, (35.3045, 25.0743), "forthgr")
#run_pipeline(2024, (35.3045, 25.0743), "forthgr")