pantierra/efast-phenocam-validation
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Added efast.

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This commit is contained in:
Felix Delattre 2025-12-22 10:10:23 +01:00
parent 607f577c6a
commit 83661762b3
6 changed files with 293 additions and 40 deletions
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29
ndvi.py
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@ -1,4 +1,3 @@
import os
import json
import numpy as np
import rasterio
@ -50,17 +49,17 @@ def generate_ndvi(year, site_position, site_name):
dst.set_band_description(1, "NDVI")
print(f"[NDVI-{source.upper()}] Saved: {output_file}")
print(f"[NDVI-{source.upper()}] Completed")
def create_ndvi_timeseries(year, site_position, site_name):
for source in ["s2", "s3"]:
output_dir = Path(f"data/{site_name}/{year}/ndvi/{source}/")
print(f"[NDVI-{source.upper()}] Creating timeseries.json...")
timeseries = []
ndvi_files = sorted(output_dir.glob("*.geotiff"))
for ndvi_file in ndvi_files:
filename = ndvi_file.name
@ -69,7 +68,7 @@ def create_ndvi_timeseries(year, site_position, site_name):
date = datetime.strptime(date_str, "%Y%m%d").isoformat()
except ValueError:
date = date_str
ndvi_value = None
try:
with rasterio.open(ndvi_file) as src:
@ -81,17 +80,17 @@ def create_ndvi_timeseries(year, site_position, site_name):
if value != 0 and not np.isnan(value):
ndvi_value = value
except Exception as e:
print(f"[NDVI-{source.upper()}] Warning: Could not sample {filename}: {e}")
timeseries.append({
"date": date,
"filename": filename,
"ndvi": ndvi_value
})
print(
f"[NDVI-{source.upper()}] Warning: Could not sample {filename}: {e}"
)
timeseries.append({"date": date, "filename": filename, "ndvi": ndvi_value})
timeseries.sort(key=lambda x: x["date"])
timeseries_file = output_dir / "timeseries.json"
with open(timeseries_file, "w") as f:
json.dump(timeseries, f, indent=2)
print(f"[NDVI-{source.upper()}] Saved: {timeseries_file} ({len(timeseries)} entries)")
print(
f"[NDVI-{source.upper()}] Saved: {timeseries_file} ({len(timeseries)} entries)"
)