pantierra/efast-phenocam-validation
1
0
Fork 0
Code Issues Pull requests Projects Releases Packages Wiki Activity

Simplified efast run.

Browse source
This commit is contained in:
Felix Delattre 2026-03-04 14:43:59 +01:00
parent 585919d130
commit 915dfd8510
2 changed files with 4 additions and 12 deletions
Download patch file Download diff file Expand all files Collapse all files

13
fusion.py
View file

@ -1,14 +1,7 @@
"""EFAST fusion: S2/S3 reflectance fusion for four scenarios.""" """EFAST fusion: S2/S3 reflectance fusion for four scenarios."""
from pathlib import Path
from datetime import datetime, timedelta from datetime import datetime, timedelta
from preselection import create_timeseries from preparation import _get_base_dir, RESOLUTION_RATIO
from preparation import (
prepare_s2,
prepare_s3,
_get_base_dir,
RESOLUTION_RATIO,
)
def _import_efast(): def _import_efast():
@ -68,9 +61,7 @@ def run_efast(season, site_position, site_name, cleaning_strategy="aggressive",
def run_all_efast_scenarios(season, site_position, site_name, sigma_value=30, date_range=None): def run_all_efast_scenarios(season, site_position, site_name, sigma_value=30, date_range=None):
create_timeseries(season, site_position, site_name) """Run EFAST fusion for all 4 scenarios. Expects prepared_*/s2 and prepared_*/s3 to exist."""
for strategy in ["aggressive", "nonaggressive"]: for strategy in ["aggressive", "nonaggressive"]:
prepare_s2(season, site_position, site_name, cleaning_strategy=strategy, date_range=date_range)
prepare_s3(season, site_position, site_name, cleaning_strategy=strategy, date_range=date_range)
run_efast(season, site_position, site_name, cleaning_strategy=strategy, sigma=None, date_range=date_range) run_efast(season, site_position, site_name, cleaning_strategy=strategy, sigma=None, date_range=date_range)
run_efast(season, site_position, site_name, cleaning_strategy=strategy, sigma=sigma_value, date_range=date_range) run_efast(season, site_position, site_name, cleaning_strategy=strategy, sigma=sigma_value, date_range=date_range)

3
run.py
View file

@ -1,4 +1,4 @@
# from fusion import run_all_efast_scenarios from fusion import run_all_efast_scenarios
# from postprocessing import process_all_scenarios # from postprocessing import process_all_scenarios
# from metrics_indices import ( # from metrics_indices import (
# create_ndvi_timeseries_post_process, # create_ndvi_timeseries_post_process,
@ -31,6 +31,7 @@ def run_pipeline(season, site_position, site_name):
print(f"Running EFAST fusion for all scenarios: {site_name}, {season}") print(f"Running EFAST fusion for all scenarios: {site_name}, {season}")
run_all_efast_scenarios(season, site_position, site_name) run_all_efast_scenarios(season, site_position, site_name)
# print(f"Post-processing data: {site_name}, {season}") # print(f"Post-processing data: {site_name}, {season}")
# process_all_scenarios(season, site_position, site_name) # process_all_scenarios(season, site_position, site_name)
# print(f"Generating NDVI for final outputs: {site_name}, {season}") # print(f"Generating NDVI for final outputs: {site_name}, {season}")