efast-phenocam-validation/run.py
Felix Delattre f9da4aef7d offset
2026-02-20 13:44:53 +01:00

53 lines
2 KiB
Python

from call_efast import run_all_efast_scenarios
from post_process import process_all_scenarios
from generate_indexes import (
generate_ndvi_raw,
create_ndvi_timeseries_raw,
generate_ndvi_post_process,
create_ndvi_timeseries_post_process,
generate_gcc_post_process,
create_gcc_timeseries_post_process,
)
from download_s2 import download_s2
from download_s3 import download_s3
from download_phenocam import download_phenocam, download_phenocam_greenness
from clouds import detect_clouds
from calculate_metrics import calculate_all_metrics
def run_pipeline(season, site_position, site_name):
"""Run pipeline (downloads + EFAST fusion + post-process + metrics)."""
try:
# Download steps (needed for new site/season)
download_s2(season, site_position, site_name)
download_s3(season, site_position, site_name)
download_phenocam(season, site_position, site_name)
download_phenocam_greenness(season, site_position, site_name)
print(f"Generating NDVI for raw data: {site_name}, {season}")
create_ndvi_timeseries_raw(season, site_position, site_name)
print(f"Running EFAST fusion for all scenarios: {site_name}, {season}")
run_all_efast_scenarios(season, site_position, site_name)
print(f"Post-processing data: {site_name}, {season}")
process_all_scenarios(season, site_position, site_name)
print(f"Generating NDVI for final outputs: {site_name}, {season}")
create_ndvi_timeseries_post_process(season, site_position, site_name)
print(f"Generating GCC for final outputs: {site_name}, {season}")
create_gcc_timeseries_post_process(season, site_position, site_name)
print(f"Calculating metrics: {site_name}, {season}")
calculate_all_metrics(season, site_name, site_position)
except Exception as e:
print(f"Error: {e}")
raise
if __name__ == "__main__":
# forthgr - FORTH Heraklion Greece, Agriculture, 2024
# sites.geojson: lon=25.0743, lat=35.3045
run_pipeline(2024, (35.3045, 25.0743), "forthgr")